BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B02SP1|AL429331
(711 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1361 0.0
>3x_Contig1795
Length = 38452
Score = 1361 bits (684), Expect = 0.0
Identities = 697/702 (99%), Gaps = 1/702 (0%)
Strand = Plus / Minus
Query: 11 gatccctatacctaggtgtcagaattctgggtgacgcccccatctggccaatcgctttat 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27223 gatccctatacctaggtgtcagaattctgggtgacgcccccatctggccaatcgctttat 27164
Query: 71 tattcgcgcacgctctacaagcgaga-cmatatacaacgtttcacatacttcacgttacg 129
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 27163 tattcgcgcacgctctacaagcgagagctatatacaacgtttcacatacttcacgttacg 27104
Query: 130 aattatgatgaaaacgccgcgaccgcattattccccatccccacttttcattgcaatcgc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27103 aattatgatgaaaacgccgcgaccgcattattccccatccccacttttcattgcaatcgc 27044
Query: 190 gttacttcttcaggtcaaaatgccatctaacttcatacaacagaaaattgatactaaaac 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27043 gttacttcttcaggtcaaaatgccatctaacttcatacaacagaaaattgatactaaaac 26984
Query: 250 tgaaagaaatacaatactgtactatagaatttttaatgacccccaaatgaccccgcgacc 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26983 tgaaagaaatacaatactgtactatagaatttttaatgacccccaaatgaccccgcgacc 26924
Query: 310 gctgccctttcagcatcaaatacaacatttttgacttctttctatcaagtaataaataaa 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26923 gctgccctttcagcatcaaatacaacatttttgacttctttctatcaagtaataaataaa 26864
Query: 370 tatttgtacagtacagtgctacttctaaactaaaatttatattgtcgttatcttatgcga 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26863 tatttgtacagtacagtgctacttctaaactaaaatttatattgtcgttatcttatgcga 26804
Query: 430 ctataccgacatcactgtctgttttccaaaaagaaccgatctttaatcttgaaatgaaaa 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26803 ctataccgacatcactgtctgttttccaaaaagaaccgatctttaatcttgaaatgaaaa 26744
Query: 490 aagtgaaaaatcggcgatgagctaagtcaaatacgtcgttgggtgtaaagacgattcgag 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26743 aagtgaaaaatcggcgatgagctaagtcaaatacgtcgttgggtgtaaagacgattcgag 26684
Query: 550 cagttcaggagtggtctaggttctgaaagacataagggggttgttgtcatctttcaataa 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26683 cagttcaggagtggtctaggttctgaaagacataagggggttgttgtcatctttcaataa 26624
Query: 610 tatacaagttgttgccttttktwtccaagaatttgagtcgtttattccgattcaatatga 669
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 26623 tatacaagttgttgccttttgtatccaagaatttgagtcgtttattccgattcaatatga 26564
Query: 670 catcagataagttaaacggaagacagttgttckagaagatcg 711
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 26563 catcagataagttaaacggaagacagttgttcgagaagatcg 26522
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5477
Number of Sequences: 1807
Number of extensions: 5477
Number of successful extensions: 133
Number of sequences better than 1.0e-20: 1
length of query: 711
length of database: 10,358,551
effective HSP length: 16
effective length of query: 695
effective length of database: 10,329,639
effective search space: 7179099105
effective search space used: 7179099105
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)